Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H3f3cP02301 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
H3f3cP02301 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
H3f3cP02301 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H3f3cP02301 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
H3f3cP02301 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H3f3cP02301 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H3f3cP02301 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
H3f3cP02301 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H3f3cP02301 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.46□□□□□ -0.73
H3f3cP02301 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
H3f3cP02301 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H3f3cP02301 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
H3f3cP02301 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
H3f3cP02301 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H3f3cP02301 Gm24845-201ENSMUST00000158034 109 ntBASIC10.46□□□□□ -0.73
H3f3cP02301 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.46□□□□□ -0.73
H3f3cP02301 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.46□□□□□ -0.73
H3f3cP02301 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
H3f3cP02301 Gm38341-201ENSMUST00000195357 515 ntBASIC10.46□□□□□ -0.73
H3f3cP02301 Gm44364-201ENSMUST00000198368 141 ntBASIC10.46□□□□□ -0.73
H3f3cP02301 Gm43758-201ENSMUST00000199500 367 ntBASIC10.46□□□□□ -0.73
H3f3cP02301 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
H3f3cP02301 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H3f3cP02301 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
H3f3cP02301 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.46□□□□□ -0.73
H3f3cP02301 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.46□□□□□ -0.73
H3f3cP02301 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.46□□□□□ -0.73
H3f3cP02301 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
H3f3cP02301 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
H3f3cP02301 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H3f3cP02301 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H3f3cP02301 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H3f3cP02301 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H3f3cP02301 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
H3f3cP02301 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
H3f3cP02301 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
H3f3cP02301 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
H3f3cP02301 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
H3f3cP02301 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H3f3cP02301 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
H3f3cP02301 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
H3f3cP02301 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
H3f3cP02301 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H3f3cP02301 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H3f3cP02301 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H3f3cP02301 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
H3f3cP02301 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
H3f3cP02301 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.46□□□□□ -0.74
H3f3cP02301 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.45□□□□□ -0.74
H3f3cP02301 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.45□□□□□ -0.74
H3f3cP02301 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.45□□□□□ -0.74
H3f3cP02301 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.45□□□□□ -0.74
H3f3cP02301 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
H3f3cP02301 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.45□□□□□ -0.74
H3f3cP02301 Gm22323-201ENSMUST00000103832 109 ntBASIC10.45□□□□□ -0.74
H3f3cP02301 Gm24255-201ENSMUST00000104481 128 ntBASIC10.45□□□□□ -0.74
H3f3cP02301 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.45□□□□□ -0.74
H3f3cP02301 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.45□□□□□ -0.74
H3f3cP02301 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Gm43822-201ENSMUST00000200285 476 ntBASIC10.45□□□□□ -0.74
H3f3cP02301 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.45□□□□□ -0.74
H3f3cP02301 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.45□□□□□ -0.74
H3f3cP02301 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
H3f3cP02301 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.45□□□□□ -0.74
H3f3cP02301 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.45□□□□□ -0.74
H3f3cP02301 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
H3f3cP02301 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
H3f3cP02301 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H3f3cP02301 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H3f3cP02301 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
H3f3cP02301 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms