Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cops6O88545 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops6O88545 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops6O88545 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.8□□□□□ -0.04
Cops6O88545 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cops6O88545 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cops6O88545 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Cops6O88545 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Gm12579-201ENSMUST00000118040 783 ntBASIC14.79□□□□□ -0.04
Cops6O88545 Gm13888-201ENSMUST00000119148 422 ntBASIC14.79□□□□□ -0.04
Cops6O88545 Gm15207-201ENSMUST00000119259 442 ntBASIC14.79□□□□□ -0.04
Cops6O88545 Gm15566-201ENSMUST00000121130 590 ntBASIC14.79□□□□□ -0.04
Cops6O88545 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cops6O88545 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.79□□□□□ -0.04
Cops6O88545 Gm8815-201ENSMUST00000173809 620 ntBASIC14.79□□□□□ -0.04
Cops6O88545 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Gm17931-201ENSMUST00000208132 634 ntBASIC14.79□□□□□ -0.04
Cops6O88545 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Gm6867-201ENSMUST00000219165 425 ntBASIC14.79□□□□□ -0.04
Cops6O88545 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.79□□□□□ -0.04
Cops6O88545 AC154290.1-201ENSMUST00000223786 1240 ntBASIC14.79□□□□□ -0.04
Cops6O88545 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Gm5537-201ENSMUST00000091117 1252 ntBASIC14.79□□□□□ -0.04
Cops6O88545 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cops6O88545 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.79□□□□□ -0.04
Cops6O88545 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cops6O88545 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.78□□□□□ -0.04
Cops6O88545 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.78□□□□□ -0.04
Cops6O88545 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Gm13916-201ENSMUST00000117368 628 ntBASIC14.78□□□□□ -0.04
Cops6O88545 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.78□□□□□ -0.04
Cops6O88545 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.78□□□□□ -0.04
Cops6O88545 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.78□□□□□ -0.04
Cops6O88545 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Cops6O88545 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.78□□□□□ -0.04
Cops6O88545 Gm5714-201ENSMUST00000197343 566 ntBASIC14.78□□□□□ -0.04
Cops6O88545 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.78□□□□□ -0.04
Cops6O88545 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.78□□□□□ -0.04
Cops6O88545 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
Cops6O88545 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.78□□□□□ -0.04
Cops6O88545 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC14.78□□□□□ -0.04
Cops6O88545 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cops6O88545 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cops6O88545 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cops6O88545 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cops6O88545 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops6O88545 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.77□□□□□ -0.04
Cops6O88545 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Cops6O88545 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops6O88545 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops6O88545 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops6O88545 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops6O88545 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cops6O88545 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cops6O88545 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.77□□□□□ -0.05
Cops6O88545 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cops6O88545 Gm19287-201ENSMUST00000203190 358 ntBASIC14.77□□□□□ -0.05
Cops6O88545 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops6O88545 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops6O88545 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cops6O88545 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms