Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Npc1O35604 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Npc1O35604 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.88□□□□□ -0.51
Npc1O35604 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.88□□□□□ -0.51
Npc1O35604 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.88□□□□□ -0.51
Npc1O35604 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Gm5070-201ENSMUST00000177599 862 ntBASIC11.88□□□□□ -0.51
Npc1O35604 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Npc1O35604 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.88□□□□□ -0.51
Npc1O35604 Gm42937-201ENSMUST00000197360 752 ntBASIC11.88□□□□□ -0.51
Npc1O35604 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.88□□□□□ -0.51
Npc1O35604 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.88□□□□□ -0.51
Npc1O35604 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Npc1O35604 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Npc1O35604 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.88□□□□□ -0.51
Npc1O35604 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Npc1O35604 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.88□□□□□ -0.51
Npc1O35604 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Npc1O35604 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.88□□□□□ -0.51
Npc1O35604 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Npc1O35604 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Npc1O35604 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Npc1O35604 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Npc1O35604 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.87□□□□□ -0.51
Npc1O35604 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Npc1O35604 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Npc1O35604 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Npc1O35604 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.87□□□□□ -0.51
Npc1O35604 Gm27390-201ENSMUST00000184516 176 ntBASIC11.87□□□□□ -0.51
Npc1O35604 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.87□□□□□ -0.51
Npc1O35604 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.87□□□□□ -0.51
Npc1O35604 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.87□□□□□ -0.51
Npc1O35604 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.87□□□□□ -0.51
Npc1O35604 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.87□□□□□ -0.51
Npc1O35604 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Npc1O35604 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.87□□□□□ -0.51
Npc1O35604 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.87□□□□□ -0.51
Npc1O35604 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Npc1O35604 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Npc1O35604 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npc1O35604 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npc1O35604 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npc1O35604 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Npc1O35604 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.86□□□□□ -0.51
Npc1O35604 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Npc1O35604 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npc1O35604 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Npc1O35604 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Npc1O35604 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Npc1O35604 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.86□□□□□ -0.51
Npc1O35604 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Npc1O35604 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Npc1O35604 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms