Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Alx4O35137 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Alx4O35137 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Alx4O35137 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Alx4O35137 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.84□□□□□ -0.67
Alx4O35137 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.84□□□□□ -0.67
Alx4O35137 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.84□□□□□ -0.67
Alx4O35137 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Alx4O35137 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.84□□□□□ -0.67
Alx4O35137 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.84□□□□□ -0.67
Alx4O35137 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Alx4O35137 Gm5706-201ENSMUST00000181525 993 ntBASIC10.84□□□□□ -0.67
Alx4O35137 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.84□□□□□ -0.67
Alx4O35137 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.84□□□□□ -0.67
Alx4O35137 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Alx4O35137 Gm10268-201ENSMUST00000085340 555 ntBASIC10.84□□□□□ -0.67
Alx4O35137 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Alx4O35137 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.84□□□□□ -0.67
Alx4O35137 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Alx4O35137 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.84□□□□□ -0.67
Alx4O35137 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Alx4O35137 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Alx4O35137 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Alx4O35137 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.83□□□□□ -0.68
Alx4O35137 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Alx4O35137 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.83□□□□□ -0.68
Alx4O35137 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.83□□□□□ -0.68
Alx4O35137 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Gm23984-201ENSMUST00000157139 203 ntBASIC10.83□□□□□ -0.68
Alx4O35137 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.83□□□□□ -0.68
Alx4O35137 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Alx4O35137 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Alx4O35137 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Alx4O35137 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms