Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Gm2991-201ENSMUST00000173338 480 ntBASIC10.78□□□□□ -0.68
Raet1bO08603 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.78□□□□□ -0.68
Raet1bO08603 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.78□□□□□ -0.68
Raet1bO08603 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.78□□□□□ -0.68
Raet1bO08603 Gm9368-201ENSMUST00000219348 831 ntBASIC10.78□□□□□ -0.68
Raet1bO08603 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.78□□□□□ -0.68
Raet1bO08603 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.78□□□□□ -0.68
Raet1bO08603 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Raet1bO08603 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.78□□□□□ -0.68
Raet1bO08603 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.77□□□□□ -0.68
Raet1bO08603 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Raet1bO08603 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Raet1bO08603 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.77□□□□□ -0.68
Raet1bO08603 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Raet1bO08603 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Raet1bO08603 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Raet1bO08603 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
Raet1bO08603 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.77□□□□□ -0.68
Raet1bO08603 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Raet1bO08603 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Raet1bO08603 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Raet1bO08603 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.77□□□□□ -0.69
Raet1bO08603 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.77□□□□□ -0.69
Raet1bO08603 Gm11222-201ENSMUST00000119005 738 ntBASIC10.77□□□□□ -0.69
Raet1bO08603 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.77□□□□□ -0.69
Raet1bO08603 Rprl1-201ENSMUST00000158050 327 ntBASIC10.77□□□□□ -0.69
Raet1bO08603 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Gm27516-201ENSMUST00000184237 98 ntBASIC10.77□□□□□ -0.69
Raet1bO08603 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.77□□□□□ -0.69
Raet1bO08603 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.77□□□□□ -0.69
Raet1bO08603 Gm6621-201ENSMUST00000193251 772 ntBASIC10.77□□□□□ -0.69
Raet1bO08603 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.77□□□□□ -0.69
Raet1bO08603 Gm18711-201ENSMUST00000199341 750 ntBASIC10.77□□□□□ -0.69
Raet1bO08603 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.77□□□□□ -0.69
Raet1bO08603 Gm6334-201ENSMUST00000207083 228 ntBASIC10.77□□□□□ -0.69
Raet1bO08603 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.77□□□□□ -0.69
Raet1bO08603 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Raet1bO08603 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.77□□□□□ -0.69
Raet1bO08603 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Raet1bO08603 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.77□□□□□ -0.69
Raet1bO08603 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.77□□□□□ -0.69
Raet1bO08603 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Raet1bO08603 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.77□□□□□ -0.69
Raet1bO08603 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Raet1bO08603 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Raet1bO08603 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Raet1bO08603 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Raet1bO08603 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Raet1bO08603 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Raet1bO08603 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Raet1bO08603 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Raet1bO08603 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Raet1bO08603 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Raet1bO08603 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Raet1bO08603 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Raet1bO08603 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Raet1bO08603 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms