Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Gm25053-201ENSMUST00000103982 133 ntBASIC11.42□□□□□ -0.58
Colca2F8VPY8 Gm25922-201ENSMUST00000104281 130 ntBASIC11.42□□□□□ -0.58
Colca2F8VPY8 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Gm13351-201ENSMUST00000118087 414 ntBASIC11.42□□□□□ -0.58
Colca2F8VPY8 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Gm24679-201ENSMUST00000158762 111 ntBASIC11.42□□□□□ -0.58
Colca2F8VPY8 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Gm42779-201ENSMUST00000198807 406 ntBASIC11.42□□□□□ -0.58
Colca2F8VPY8 Gm25053-202ENSMUST00000199731 132 ntBASIC11.42□□□□□ -0.58
Colca2F8VPY8 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Gm18968-201ENSMUST00000221319 862 ntBASIC11.42□□□□□ -0.58
Colca2F8VPY8 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.42□□□□□ -0.58
Colca2F8VPY8 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.42□□□□□ -0.58
Colca2F8VPY8 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.42□□□□□ -0.58
Colca2F8VPY8 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.42□□□□□ -0.58
Colca2F8VPY8 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.42□□□□□ -0.58
Colca2F8VPY8 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.42□□□□□ -0.58
Colca2F8VPY8 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Colca2F8VPY8 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Mir671-201ENSMUST00000102432 98 ntBASIC11.41□□□□□ -0.58
Colca2F8VPY8 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Gm11560-201ENSMUST00000117567 948 ntBASIC11.41□□□□□ -0.58
Colca2F8VPY8 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.41□□□□□ -0.58
Colca2F8VPY8 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.41□□□□□ -0.58
Colca2F8VPY8 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.41□□□□□ -0.58
Colca2F8VPY8 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.41□□□□□ -0.58
Colca2F8VPY8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Colca2F8VPY8 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Colca2F8VPY8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Colca2F8VPY8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Colca2F8VPY8 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.4□□□□□ -0.58
Colca2F8VPY8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Colca2F8VPY8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Colca2F8VPY8 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Colca2F8VPY8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Colca2F8VPY8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Colca2F8VPY8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Colca2F8VPY8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Colca2F8VPY8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Colca2F8VPY8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Colca2F8VPY8 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms