Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gm28043E0CXC2 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Gm11591-201ENSMUST00000120063 702 ntBASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Gm25261-201ENSMUST00000157416 134 ntBASIC12.21□□□□□ -0.45
Gm28043E0CXC2 AY702102-202ENSMUST00000194651 1173 ntBASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Gm28043E0CXC2 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm28043E0CXC2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
Gm28043E0CXC2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.21□□□□□ -0.46
Gm28043E0CXC2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Gm28043E0CXC2 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm28043E0CXC2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm28043E0CXC2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Gm28043E0CXC2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Gm28043E0CXC2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm28043E0CXC2 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm28043E0CXC2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.21□□□□□ -0.46
Gm28043E0CXC2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Gm28043E0CXC2 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm28043E0CXC2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Gm28043E0CXC2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Gm16296-201ENSMUST00000159905 325 ntBASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Gm27390-201ENSMUST00000184516 176 ntBASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.2□□□□□ -0.46
Gm28043E0CXC2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms