Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tmf1B9EKI3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tmf1B9EKI3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tmf1B9EKI3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tmf1B9EKI3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tmf1B9EKI3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Tmf1B9EKI3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tmf1B9EKI3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tmf1B9EKI3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tmf1B9EKI3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tmf1B9EKI3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tmf1B9EKI3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tmf1B9EKI3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tmf1B9EKI3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
Tmf1B9EKI3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Gm42748-201ENSMUST00000199354 2341 ntBASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Gm12036-201ENSMUST00000120008 530 ntBASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Gm25732-201ENSMUST00000175168 60 ntBASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tmf1B9EKI3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm11509-201ENSMUST00000117358 325 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm12616-201ENSMUST00000118594 382 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm12624-201ENSMUST00000177615 382 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm12621-201ENSMUST00000177760 382 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm12615-201ENSMUST00000177970 382 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm12622-201ENSMUST00000177975 382 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm12627-201ENSMUST00000178412 382 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm12625-201ENSMUST00000179122 382 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm12614-201ENSMUST00000179586 382 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm12613-201ENSMUST00000180323 382 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm42629-201ENSMUST00000199063 1102 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 AC153929.1-201ENSMUST00000219009 303 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 AC121960.1-201ENSMUST00000227982 564 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm5705-201ENSMUST00000066241 711 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm26448-201ENSMUST00000082446 203 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Gm8522-201ENSMUST00000118416 1929 ntBASIC16.4■□□□□ 0.22
Tmf1B9EKI3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tmf1B9EKI3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
Tmf1B9EKI3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC16.39■□□□□ 0.22
Tmf1B9EKI3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC16.39■□□□□ 0.22
Tmf1B9EKI3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Tmf1B9EKI3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
Tmf1B9EKI3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
Tmf1B9EKI3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC16.39■□□□□ 0.21
Tmf1B9EKI3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tmf1B9EKI3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tmf1B9EKI3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tmf1B9EKI3 Gm29100-201ENSMUST00000187564 4410 ntBASIC16.39■□□□□ 0.21
Tmf1B9EKI3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tmf1B9EKI3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tmf1B9EKI3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tmf1B9EKI3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Tmf1B9EKI3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tmf1B9EKI3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tmf1B9EKI3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms