Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Gm5419-201ENSMUST00000119301 527 ntBASIC13.46□□□□□ -0.25
Krt28A6BLY7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Gm14760-201ENSMUST00000121831 999 ntBASIC13.46□□□□□ -0.25
Krt28A6BLY7 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.46□□□□□ -0.25
Krt28A6BLY7 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Gm4310-201ENSMUST00000177847 889 ntBASIC13.46□□□□□ -0.25
Krt28A6BLY7 Gm26134-201ENSMUST00000178484 110 ntBASIC13.46□□□□□ -0.25
Krt28A6BLY7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.46□□□□□ -0.25
Krt28A6BLY7 Gm12407-201ENSMUST00000180219 324 ntBASIC13.46□□□□□ -0.25
Krt28A6BLY7 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Krt28A6BLY7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Krt28A6BLY7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Krt28A6BLY7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Krt28A6BLY7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Krt28A6BLY7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Krt28A6BLY7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Krt28A6BLY7 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Krt28A6BLY7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Krt28A6BLY7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
Krt28A6BLY7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Krt28A6BLY7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Krt28A6BLY7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Krt28A6BLY7 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.45□□□□□ -0.26
Krt28A6BLY7 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Gm7541-201ENSMUST00000118361 535 ntBASIC13.45□□□□□ -0.26
Krt28A6BLY7 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.45□□□□□ -0.26
Krt28A6BLY7 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.45□□□□□ -0.26
Krt28A6BLY7 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Gm18204-201ENSMUST00000209835 793 ntBASIC13.45□□□□□ -0.26
Krt28A6BLY7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Krt28A6BLY7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.44□□□□□ -0.26
Krt28A6BLY7 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Krt28A6BLY7 Gm25766-201ENSMUST00000104101 131 ntBASIC13.44□□□□□ -0.26
Krt28A6BLY7 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms