Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim13Q9CYB0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Gm12490-201ENSMUST00000120255 560 ntBASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Gm6745-201ENSMUST00000199216 526 ntBASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Gm9908-201ENSMUST00000211534 448 ntBASIC11.25□□□□□ -0.61
Trim13Q9CYB0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim13Q9CYB0 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim13Q9CYB0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms