Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ssu72Q9CY97 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Gm24934-201ENSMUST00000103764 111 ntBASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Gm8652-201ENSMUST00000181363 964 ntBASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Gm38241-201ENSMUST00000192641 898 ntBASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Gm5904-201ENSMUST00000210286 865 ntBASIC12.05□□□□□ -0.48
Ssu72Q9CY97 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Gm2423-201ENSMUST00000074863 733 ntBASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ssu72Q9CY97 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Gm24644-201ENSMUST00000157114 139 ntBASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Gm19087-201ENSMUST00000191430 946 ntBASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Gm43002-201ENSMUST00000200310 155 ntBASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.04□□□□□ -0.48
Ssu72Q9CY97 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ssu72Q9CY97 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms