Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gm4768-201ENSMUST00000206199 686 ntBASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gm6007-201ENSMUST00000208170 823 ntBASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.97□□□□□ -0.65
Krt88Q9CPR6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Krt88Q9CPR6 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Gm14928-201ENSMUST00000120198 477 ntBASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Krt88Q9CPR6 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Krt88Q9CPR6 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.96□□□□□ -0.66
Krt88Q9CPR6 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Krt88Q9CPR6 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Krt88Q9CPR6 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Krt88Q9CPR6 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Krt88Q9CPR6 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Krt88Q9CPR6 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Krt88Q9CPR6 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.96□□□□□ -0.66
Krt88Q9CPR6 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Krt88Q9CPR6 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.96□□□□□ -0.66
Krt88Q9CPR6 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.96□□□□□ -0.66
Krt88Q9CPR6 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Krt88Q9CPR6 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.96□□□□□ -0.66
Krt88Q9CPR6 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Krt88Q9CPR6 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.95□□□□□ -0.66
Krt88Q9CPR6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Krt88Q9CPR6 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Krt88Q9CPR6 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Krt88Q9CPR6 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Krt88Q9CPR6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.95□□□□□ -0.66
Krt88Q9CPR6 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Krt88Q9CPR6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Krt88Q9CPR6 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Krt88Q9CPR6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Krt88Q9CPR6 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Krt88Q9CPR6 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Krt88Q9CPR6 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Krt88Q9CPR6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms