Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sf3b1Q99NB9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Mir1943-201ENSMUST00000158276 73 ntBASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Gm5523-201ENSMUST00000180415 997 ntBASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Gm18711-201ENSMUST00000199341 750 ntBASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b1Q99NB9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Gm12616-201ENSMUST00000118594 382 ntBASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Rprl1-201ENSMUST00000158050 327 ntBASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Gm23699-201ENSMUST00000158835 135 ntBASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Gm12624-201ENSMUST00000177615 382 ntBASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Gm12621-201ENSMUST00000177760 382 ntBASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Gm12615-201ENSMUST00000177970 382 ntBASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Gm12622-201ENSMUST00000177975 382 ntBASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Gm12627-201ENSMUST00000178412 382 ntBASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Gm12625-201ENSMUST00000179122 382 ntBASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Gm12614-201ENSMUST00000179586 382 ntBASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Gm12613-201ENSMUST00000180323 382 ntBASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b1Q99NB9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 110.4 ms