Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cttnbp2nlQ99LJ0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cttnbp2nlQ99LJ0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.32□□□□□ -0.44
Cttnbp2nlQ99LJ0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cttnbp2nlQ99LJ0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cttnbp2nlQ99LJ0 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cttnbp2nlQ99LJ0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cttnbp2nlQ99LJ0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cttnbp2nlQ99LJ0 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cttnbp2nlQ99LJ0 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.32□□□□□ -0.44
Cttnbp2nlQ99LJ0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm6745-201ENSMUST00000199216 526 ntBASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm5186-201ENSMUST00000218781 920 ntBASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cttnbp2nlQ99LJ0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm9022-201ENSMUST00000182482 992 ntBASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm32025-201ENSMUST00000217960 307 ntBASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm19163-201ENSMUST00000223313 780 ntBASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gm24526-201ENSMUST00000082921 158 ntBASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cttnbp2nlQ99LJ0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms