Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.26□□□□□ -0.45
Cdk9Q99J95 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Gm12928-201ENSMUST00000117115 573 ntBASIC12.26□□□□□ -0.45
Cdk9Q99J95 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Gm15703-201ENSMUST00000120250 880 ntBASIC12.26□□□□□ -0.45
Cdk9Q99J95 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.26□□□□□ -0.45
Cdk9Q99J95 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Gm18187-201ENSMUST00000196476 984 ntBASIC12.26□□□□□ -0.45
Cdk9Q99J95 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.26□□□□□ -0.45
Cdk9Q99J95 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.26□□□□□ -0.45
Cdk9Q99J95 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk9Q99J95 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.25□□□□□ -0.45
Cdk9Q99J95 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.25□□□□□ -0.45
Cdk9Q99J95 Gm8463-201ENSMUST00000208573 613 ntBASIC12.25□□□□□ -0.45
Cdk9Q99J95 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.25□□□□□ -0.45
Cdk9Q99J95 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Gm5356-201ENSMUST00000093326 615 ntBASIC12.25□□□□□ -0.45
Cdk9Q99J95 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.25□□□□□ -0.45
Cdk9Q99J95 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.25□□□□□ -0.45
Cdk9Q99J95 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk9Q99J95 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk9Q99J95 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms