Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Gm24548-201ENSMUST00000158650 108 ntBASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Mir6420-201ENSMUST00000185032 102 ntBASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Gm7399-201ENSMUST00000032395 858 ntBASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhga11Q91XY8 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gm7809-201ENSMUST00000153199 742 ntBASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gm23119-201ENSMUST00000158610 140 ntBASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gm3890-201ENSMUST00000182416 207 ntBASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gm37008-201ENSMUST00000195712 319 ntBASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gm44958-201ENSMUST00000203734 736 ntBASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhga11Q91XY8 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga11Q91XY8 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga11Q91XY8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga11Q91XY8 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga11Q91XY8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga11Q91XY8 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga11Q91XY8 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhga11Q91XY8 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga11Q91XY8 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhga11Q91XY8 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhga11Q91XY8 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms