Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Gm11246-201ENSMUST00000120880 345 ntBASIC12.06□□□□□ -0.48
Vsx1Q91V10 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.06□□□□□ -0.48
Vsx1Q91V10 Gm12628-201ENSMUST00000122193 382 ntBASIC12.06□□□□□ -0.48
Vsx1Q91V10 Gm4726-201ENSMUST00000135604 736 ntBASIC12.06□□□□□ -0.48
Vsx1Q91V10 Gm6019-201ENSMUST00000148369 736 ntBASIC12.06□□□□□ -0.48
Vsx1Q91V10 Gm23218-201ENSMUST00000158124 276 ntBASIC12.06□□□□□ -0.48
Vsx1Q91V10 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.06□□□□□ -0.48
Vsx1Q91V10 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.06□□□□□ -0.48
Vsx1Q91V10 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.06□□□□□ -0.48
Vsx1Q91V10 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.06□□□□□ -0.48
Vsx1Q91V10 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.06□□□□□ -0.48
Vsx1Q91V10 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.06□□□□□ -0.48
Vsx1Q91V10 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx1Q91V10 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.05□□□□□ -0.48
Vsx1Q91V10 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.05□□□□□ -0.48
Vsx1Q91V10 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Gm24891-201ENSMUST00000104391 136 ntBASIC12.05□□□□□ -0.48
Vsx1Q91V10 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Vsx1Q91V10 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Gm3332-201ENSMUST00000189337 928 ntBASIC12.05□□□□□ -0.48
Vsx1Q91V10 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.05□□□□□ -0.48
Vsx1Q91V10 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.05□□□□□ -0.48
Vsx1Q91V10 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vsx1Q91V10 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.04□□□□□ -0.48
Vsx1Q91V10 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.04□□□□□ -0.48
Vsx1Q91V10 Gm14585-201ENSMUST00000120713 634 ntBASIC12.04□□□□□ -0.48
Vsx1Q91V10 Gm8199-201ENSMUST00000121323 823 ntBASIC12.04□□□□□ -0.48
Vsx1Q91V10 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Gm23085-201ENSMUST00000157849 293 ntBASIC12.04□□□□□ -0.48
Vsx1Q91V10 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.04□□□□□ -0.48
Vsx1Q91V10 Gm23771-201ENSMUST00000178702 110 ntBASIC12.04□□□□□ -0.48
Vsx1Q91V10 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms