Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Zc3h3Q8CHP0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Mir744-201ENSMUST00000103261 100 ntBASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Gm37852-201ENSMUST00000193027 350 ntBASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Gm8574-201ENSMUST00000203207 924 ntBASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Gm18561-201ENSMUST00000206027 804 ntBASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Zc3h3Q8CHP0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Gm5419-201ENSMUST00000119301 527 ntBASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.84□□□□□ -0.51
Zc3h3Q8CHP0 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms