Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Gm27046-201ENSMUST00000182160 463 ntBASIC12.06□□□□□ -0.48
Ubp1Q811S7 Gm27320-201ENSMUST00000184892 109 ntBASIC12.06□□□□□ -0.48
Ubp1Q811S7 Gm3096-201ENSMUST00000185770 364 ntBASIC12.06□□□□□ -0.48
Ubp1Q811S7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Gm37259-201ENSMUST00000193903 849 ntBASIC12.06□□□□□ -0.48
Ubp1Q811S7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.06□□□□□ -0.48
Ubp1Q811S7 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.06□□□□□ -0.48
Ubp1Q811S7 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.06□□□□□ -0.48
Ubp1Q811S7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ubp1Q811S7 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.05□□□□□ -0.48
Ubp1Q811S7 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Gm24934-201ENSMUST00000103764 111 ntBASIC12.05□□□□□ -0.48
Ubp1Q811S7 Gm22323-201ENSMUST00000103832 109 ntBASIC12.05□□□□□ -0.48
Ubp1Q811S7 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.05□□□□□ -0.48
Ubp1Q811S7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Gm10312-201ENSMUST00000078515 489 ntBASIC12.05□□□□□ -0.48
Ubp1Q811S7 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 AC122881.1-201ENSMUST00000225757 2695 ntBASIC12.05□□□□□ -0.48
Ubp1Q811S7 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.05□□□□□ -0.48
Ubp1Q811S7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.05□□□□□ -0.48
Ubp1Q811S7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.05□□□□□ -0.48
Ubp1Q811S7 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ubp1Q811S7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.04□□□□□ -0.48
Ubp1Q811S7 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.04□□□□□ -0.48
Ubp1Q811S7 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ubp1Q811S7 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ubp1Q811S7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms