Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trnp1Q80ZI1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trnp1Q80ZI1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.64□□□□□ -0.23
Trnp1Q80ZI1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trnp1Q80ZI1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trnp1Q80ZI1 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trnp1Q80ZI1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trnp1Q80ZI1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trnp1Q80ZI1 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.64□□□□□ -0.23
Trnp1Q80ZI1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.64□□□□□ -0.23
Trnp1Q80ZI1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Gm15036-201ENSMUST00000118880 400 ntBASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Gm9089-201ENSMUST00000122027 526 ntBASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Mt1-202ENSMUST00000211807 1085 ntBASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trnp1Q80ZI1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm14807-201ENSMUST00000116640 983 ntBASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm15615-201ENSMUST00000118876 198 ntBASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm13117-201ENSMUST00000120894 691 ntBASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm11354-201ENSMUST00000121974 422 ntBASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm6450-201ENSMUST00000200896 574 ntBASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm45500-201ENSMUST00000211676 803 ntBASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trnp1Q80ZI1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trnp1Q80ZI1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms