Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.65□□□□□ -0.54
Vrk1Q80X41 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.65□□□□□ -0.54
Vrk1Q80X41 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.65□□□□□ -0.54
Vrk1Q80X41 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.65□□□□□ -0.54
Vrk1Q80X41 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.65□□□□□ -0.54
Vrk1Q80X41 Gm5455-201ENSMUST00000058710 715 ntBASIC11.65□□□□□ -0.54
Vrk1Q80X41 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.65□□□□□ -0.55
Vrk1Q80X41 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.65□□□□□ -0.55
Vrk1Q80X41 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Vrk1Q80X41 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Vrk1Q80X41 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Vrk1Q80X41 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.64□□□□□ -0.55
Vrk1Q80X41 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.64□□□□□ -0.55
Vrk1Q80X41 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.64□□□□□ -0.55
Vrk1Q80X41 Gm11941-201ENSMUST00000119904 610 ntBASIC11.64□□□□□ -0.55
Vrk1Q80X41 Gm25881-201ENSMUST00000157783 103 ntBASIC11.64□□□□□ -0.55
Vrk1Q80X41 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.64□□□□□ -0.55
Vrk1Q80X41 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.64□□□□□ -0.55
Vrk1Q80X41 Mir7032-201ENSMUST00000185154 79 ntBASIC11.64□□□□□ -0.55
Vrk1Q80X41 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.64□□□□□ -0.55
Vrk1Q80X41 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.64□□□□□ -0.55
Vrk1Q80X41 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vrk1Q80X41 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.63□□□□□ -0.55
Vrk1Q80X41 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.63□□□□□ -0.55
Vrk1Q80X41 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Vrk1Q80X41 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.63□□□□□ -0.55
Vrk1Q80X41 Gm23251-201ENSMUST00000103773 110 ntBASIC11.63□□□□□ -0.55
Vrk1Q80X41 Gm15131-201ENSMUST00000119124 595 ntBASIC11.63□□□□□ -0.55
Vrk1Q80X41 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.63□□□□□ -0.55
Vrk1Q80X41 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.63□□□□□ -0.55
Vrk1Q80X41 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms