Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Mir6956-201ENSMUST00000183598 62 ntBASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Gm27331-201ENSMUST00000183705 60 ntBASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Gm38671-201ENSMUST00000200573 130 ntBASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Gm24526-201ENSMUST00000082921 158 ntBASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TwistnbQ78WZ7 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.35□□□□□ -0.43
TwistnbQ78WZ7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Gm13369-201ENSMUST00000119442 987 ntBASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Gm9083-201ENSMUST00000120423 819 ntBASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Mir6392-201ENSMUST00000184924 108 ntBASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.34□□□□□ -0.43
TwistnbQ78WZ7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms