Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Vma21Q78T54 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Vma21Q78T54 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Vma21Q78T54 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Vma21Q78T54 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Vma21Q78T54 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.89□□□□□ -0.83
Vma21Q78T54 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Vma21Q78T54 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Vma21Q78T54 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Vma21Q78T54 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Vma21Q78T54 Gm12314-201ENSMUST00000118104 538 ntBASIC9.89□□□□□ -0.83
Vma21Q78T54 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.89□□□□□ -0.83
Vma21Q78T54 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.89□□□□□ -0.83
Vma21Q78T54 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.89□□□□□ -0.83
Vma21Q78T54 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Gm27023-201ENSMUST00000182372 285 ntBASIC9.89□□□□□ -0.83
Vma21Q78T54 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Vma21Q78T54 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.89□□□□□ -0.83
Vma21Q78T54 Gm5035-201ENSMUST00000215581 927 ntBASIC9.89□□□□□ -0.83
Vma21Q78T54 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.89□□□□□ -0.83
Vma21Q78T54 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.89□□□□□ -0.83
Vma21Q78T54 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Vma21Q78T54 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC9.89□□□□□ -0.83
Vma21Q78T54 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Vma21Q78T54 Gm9279-201ENSMUST00000223175 1606 ntBASIC9.89□□□□□ -0.83
Vma21Q78T54 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Vma21Q78T54 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Vma21Q78T54 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Vma21Q78T54 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Vma21Q78T54 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Vma21Q78T54 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.88□□□□□ -0.83
Vma21Q78T54 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.88□□□□□ -0.83
Vma21Q78T54 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Gm5620-201ENSMUST00000077991 1348 ntBASIC9.88□□□□□ -0.83
Vma21Q78T54 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.88□□□□□ -0.83
Vma21Q78T54 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.88□□□□□ -0.83
Vma21Q78T54 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.88□□□□□ -0.83
Vma21Q78T54 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.88□□□□□ -0.83
Vma21Q78T54 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.88□□□□□ -0.83
Vma21Q78T54 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC9.88□□□□□ -0.83
Vma21Q78T54 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Vma21Q78T54 Gm8738-201ENSMUST00000172606 329 ntBASIC9.88□□□□□ -0.83
Vma21Q78T54 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Gm27682-201ENSMUST00000183930 110 ntBASIC9.88□□□□□ -0.83
Vma21Q78T54 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC9.88□□□□□ -0.83
Vma21Q78T54 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.88□□□□□ -0.83
Vma21Q78T54 Tyms-ps-201ENSMUST00000219550 915 ntBASIC9.88□□□□□ -0.83
Vma21Q78T54 Gm5781-201ENSMUST00000219792 443 ntBASIC9.88□□□□□ -0.83
Vma21Q78T54 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.88□□□□□ -0.83
Vma21Q78T54 Gm10076-201ENSMUST00000073238 384 ntBASIC9.88□□□□□ -0.83
Vma21Q78T54 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.88□□□□□ -0.83
Vma21Q78T54 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Vma21Q78T54 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Vma21Q78T54 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms