Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm44405-201ENSMUST00000198952 126 ntBASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Gm6180-201ENSMUST00000065243 498 ntBASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scaf4Q6PFF0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Gm24644-201ENSMUST00000157114 139 ntBASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Gm23984-201ENSMUST00000157139 203 ntBASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Gm5356-201ENSMUST00000093326 615 ntBASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scaf4Q6PFF0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Gm13736-201ENSMUST00000119272 253 ntBASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Gm12502-201ENSMUST00000120197 444 ntBASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Gm5866-201ENSMUST00000177881 973 ntBASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Gm26927-201ENSMUST00000182385 965 ntBASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Gm8515-201ENSMUST00000194852 576 ntBASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Gm9908-201ENSMUST00000211534 448 ntBASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Gm39404-201ENSMUST00000216350 313 ntBASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Gm45925-201ENSMUST00000218882 744 ntBASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Gm17794-201ENSMUST00000220252 955 ntBASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scaf4Q6PFF0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms