Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Cog3-203ENSMUST00000227473 4197 ntBASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Gm11978-201ENSMUST00000122315 466 ntBASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Gm44397-201ENSMUST00000195950 113 ntBASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Gm6983-201ENSMUST00000214912 628 ntBASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf220Q6PDX6 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf220Q6PDX6 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.52□□□□□ -0.56
Rnf220Q6PDX6 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Rnf220Q6PDX6 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf220Q6PDX6 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf220Q6PDX6 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf220Q6PDX6 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf220Q6PDX6 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf220Q6PDX6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf220Q6PDX6 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.52□□□□□ -0.56
Rnf220Q6PDX6 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf220Q6PDX6 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Rnf220Q6PDX6 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.52□□□□□ -0.56
Rnf220Q6PDX6 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Gm12341-201ENSMUST00000119724 503 ntBASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Gm14057-201ENSMUST00000120631 482 ntBASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Gm16215-201ENSMUST00000161990 637 ntBASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf220Q6PDX6 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.51□□□□□ -0.57
Rnf220Q6PDX6 Gm5687-201ENSMUST00000118252 640 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms