Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slx4Q6P1D7 Gm44414-201ENSMUST00000203660 2109 ntBASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Gm14270-201ENSMUST00000118388 846 ntBASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Gm24809-201ENSMUST00000175318 271 ntBASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Gm28833-201ENSMUST00000189671 559 ntBASIC18.4■□□□□ 0.54
Slx4Q6P1D7 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slx4Q6P1D7 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slx4Q6P1D7 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slx4Q6P1D7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Slx4Q6P1D7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC18.39■□□□□ 0.54
Slx4Q6P1D7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slx4Q6P1D7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC18.39■□□□□ 0.53
Slx4Q6P1D7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Gm5700-201ENSMUST00000191483 989 ntBASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Gm37852-201ENSMUST00000193027 350 ntBASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Gm29763-201ENSMUST00000205306 616 ntBASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 CT573047.1-201ENSMUST00000223652 851 ntBASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slx4Q6P1D7 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Gm11619-201ENSMUST00000117474 237 ntBASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Gm25554-201ENSMUST00000158075 113 ntBASIC18.38■□□□□ 0.53
Slx4Q6P1D7 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Gm26616-202ENSMUST00000195676 3107 ntBASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Gm12663-201ENSMUST00000118481 958 ntBASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Gm12274-201ENSMUST00000120062 385 ntBASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Gm37638-201ENSMUST00000194337 1123 ntBASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Gm4978-201ENSMUST00000071565 801 ntBASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slx4Q6P1D7 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Gm17435-202ENSMUST00000212699 1998 ntBASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 AC158636.1-201ENSMUST00000220118 1393 ntBASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slx4Q6P1D7 Gm17214-201ENSMUST00000164501 541 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms