Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Gm13809-201ENSMUST00000117921 597 ntBASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Gm27390-201ENSMUST00000184516 176 ntBASIC14.26□□□□□ -0.13
Krt40Q6IFX3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Ginm1-202ENSMUST00000065124 300 ntBASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Krt40Q6IFX3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Gm12176-201ENSMUST00000121420 875 ntBASIC14.25□□□□□ -0.13
Krt40Q6IFX3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Gm5523-201ENSMUST00000180415 997 ntBASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Gm45118-201ENSMUST00000208928 825 ntBASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Gm45575-201ENSMUST00000210283 548 ntBASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Gm2553-201ENSMUST00000215986 605 ntBASIC14.25□□□□□ -0.13
Krt40Q6IFX3 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.25□□□□□ -0.13
Krt40Q6IFX3 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.25□□□□□ -0.13
Krt40Q6IFX3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Krt40Q6IFX3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Gm12036-201ENSMUST00000120008 530 ntBASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Gm15432-201ENSMUST00000121106 195 ntBASIC14.24□□□□□ -0.13
Krt40Q6IFX3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Gm22334-201ENSMUST00000158070 133 ntBASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Gm37835-201ENSMUST00000193305 361 ntBASIC14.24□□□□□ -0.13
Krt40Q6IFX3 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Krt40Q6IFX3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms