Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm8355-201ENSMUST00000177767 1941 ntBASIC9.27□□□□□ -0.93
Foxc1Q61572 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Foxc1Q61572 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Foxc1Q61572 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Foxc1Q61572 Gm5187-201ENSMUST00000117317 991 ntBASIC9.27□□□□□ -0.93
Foxc1Q61572 Gm8805-201ENSMUST00000117848 313 ntBASIC9.27□□□□□ -0.93
Foxc1Q61572 Gm16479-201ENSMUST00000121706 932 ntBASIC9.27□□□□□ -0.93
Foxc1Q61572 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.27□□□□□ -0.93
Foxc1Q61572 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.27□□□□□ -0.93
Foxc1Q61572 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.27□□□□□ -0.93
Foxc1Q61572 Esd-ps-201ENSMUST00000170684 847 ntBASIC9.27□□□□□ -0.93
Foxc1Q61572 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC9.27□□□□□ -0.93
Foxc1Q61572 Gm37008-201ENSMUST00000195712 319 ntBASIC9.27□□□□□ -0.93
Foxc1Q61572 Gm18916-201ENSMUST00000198264 1246 ntBASIC9.27□□□□□ -0.93
Foxc1Q61572 Gm43822-201ENSMUST00000200285 476 ntBASIC9.27□□□□□ -0.93
Foxc1Q61572 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC9.27□□□□□ -0.93
Foxc1Q61572 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC9.27□□□□□ -0.93
Foxc1Q61572 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC9.27□□□□□ -0.93
Foxc1Q61572 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Foxc1Q61572 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Foxc1Q61572 Gm10268-201ENSMUST00000085340 555 ntBASIC9.27□□□□□ -0.93
Foxc1Q61572 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Foxc1Q61572 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC9.27□□□□□ -0.93
Foxc1Q61572 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.27□□□□□ -0.93
Foxc1Q61572 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Foxc1Q61572 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Foxc1Q61572 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Gm42462-201ENSMUST00000196543 1363 ntBASIC9.26□□□□□ -0.93
Foxc1Q61572 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Arl14ep-202ENSMUST00000093883 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Zfp125-201ENSMUST00000079237 2488 ntBASIC9.26□□□□□ -0.93
Foxc1Q61572 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 1700016H13Rik-202ENSMUST00000119824 1447 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Gm15103-201ENSMUST00000119893 871 ntBASIC9.26□□□□□ -0.93
Foxc1Q61572 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Gm27514-201ENSMUST00000183692 110 ntBASIC9.26□□□□□ -0.93
Foxc1Q61572 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC9.26□□□□□ -0.93
Foxc1Q61572 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Foxc1Q61572 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC9.26□□□□□ -0.93
Foxc1Q61572 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 165.9 ms