Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.67□□□□□ -0.38
Smarcd1Q61466 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Smarcd1Q61466 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.66□□□□□ -0.38
Smarcd1Q61466 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.66□□□□□ -0.38
Smarcd1Q61466 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.66□□□□□ -0.38
Smarcd1Q61466 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Mir7677-201ENSMUST00000184226 67 ntBASIC12.66□□□□□ -0.38
Smarcd1Q61466 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Gm43184-201ENSMUST00000197247 542 ntBASIC12.66□□□□□ -0.38
Smarcd1Q61466 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.66□□□□□ -0.38
Smarcd1Q61466 Gm270-201ENSMUST00000223010 976 ntBASIC12.66□□□□□ -0.38
Smarcd1Q61466 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.66□□□□□ -0.38
Smarcd1Q61466 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.66□□□□□ -0.38
Smarcd1Q61466 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Smarcd1Q61466 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Gm26286-201ENSMUST00000104166 134 ntBASIC12.65□□□□□ -0.38
Smarcd1Q61466 Gm23200-201ENSMUST00000104379 132 ntBASIC12.65□□□□□ -0.38
Smarcd1Q61466 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Gm15610-201ENSMUST00000120584 195 ntBASIC12.65□□□□□ -0.38
Smarcd1Q61466 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.65□□□□□ -0.38
Smarcd1Q61466 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.65□□□□□ -0.38
Smarcd1Q61466 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Smarcd1Q61466 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smarcd1Q61466 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Smarcd1Q61466 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.65□□□□□ -0.39
Smarcd1Q61466 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.65□□□□□ -0.39
Smarcd1Q61466 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Smarcd1Q61466 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Smarcd1Q61466 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcd1Q61466 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcd1Q61466 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcd1Q61466 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcd1Q61466 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcd1Q61466 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcd1Q61466 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smarcd1Q61466 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms