Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.88□□□□□ -0.51
Vsx2Q61412 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Vsx2Q61412 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Vsx2Q61412 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Vsx2Q61412 Gm14726-201ENSMUST00000120623 896 ntBASIC11.88□□□□□ -0.51
Vsx2Q61412 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Vsx2Q61412 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.88□□□□□ -0.51
Vsx2Q61412 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Gm20482-202ENSMUST00000174729 825 ntBASIC11.88□□□□□ -0.51
Vsx2Q61412 Gm27320-201ENSMUST00000184892 109 ntBASIC11.88□□□□□ -0.51
Vsx2Q61412 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.88□□□□□ -0.51
Vsx2Q61412 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.88□□□□□ -0.51
Vsx2Q61412 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Vsx2Q61412 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Vsx2Q61412 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.88□□□□□ -0.51
Vsx2Q61412 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.88□□□□□ -0.51
Vsx2Q61412 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vsx2Q61412 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.88□□□□□ -0.51
Vsx2Q61412 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.87□□□□□ -0.51
Vsx2Q61412 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Vsx2Q61412 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.87□□□□□ -0.51
Vsx2Q61412 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Vsx2Q61412 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.87□□□□□ -0.51
Vsx2Q61412 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Gm23270-201ENSMUST00000104055 131 ntBASIC11.87□□□□□ -0.51
Vsx2Q61412 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Vsx2Q61412 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Vsx2Q61412 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.87□□□□□ -0.51
Vsx2Q61412 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.87□□□□□ -0.51
Vsx2Q61412 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.87□□□□□ -0.51
Vsx2Q61412 Gm37259-201ENSMUST00000193903 849 ntBASIC11.87□□□□□ -0.51
Vsx2Q61412 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.87□□□□□ -0.51
Vsx2Q61412 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.87□□□□□ -0.51
Vsx2Q61412 Gm39404-201ENSMUST00000216350 313 ntBASIC11.87□□□□□ -0.51
Vsx2Q61412 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Vsx2Q61412 Gm10076-201ENSMUST00000073238 384 ntBASIC11.87□□□□□ -0.51
Vsx2Q61412 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Vsx2Q61412 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Vsx2Q61412 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.87□□□□□ -0.51
Vsx2Q61412 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.87□□□□□ -0.51
Vsx2Q61412 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Vsx2Q61412 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Vsx2Q61412 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.87□□□□□ -0.51
Vsx2Q61412 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Vsx2Q61412 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vsx2Q61412 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Vsx2Q61412 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms