Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
ClpbQ60649 Cog3-203ENSMUST00000227473 4197 ntBASIC11.71□□□□□ -0.54
ClpbQ60649 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
ClpbQ60649 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.7□□□□□ -0.54
ClpbQ60649 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Gm23270-201ENSMUST00000104055 131 ntBASIC11.7□□□□□ -0.54
ClpbQ60649 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
ClpbQ60649 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
ClpbQ60649 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.7□□□□□ -0.54
ClpbQ60649 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.7□□□□□ -0.54
ClpbQ60649 Gm17376-201ENSMUST00000166016 84 ntBASIC11.7□□□□□ -0.54
ClpbQ60649 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
ClpbQ60649 Gm27046-201ENSMUST00000182160 463 ntBASIC11.7□□□□□ -0.54
ClpbQ60649 Gm4857-201ENSMUST00000192718 785 ntBASIC11.7□□□□□ -0.54
ClpbQ60649 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.7□□□□□ -0.54
ClpbQ60649 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.7□□□□□ -0.54
ClpbQ60649 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.7□□□□□ -0.54
ClpbQ60649 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.7□□□□□ -0.54
ClpbQ60649 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
ClpbQ60649 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
ClpbQ60649 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ClpbQ60649 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClpbQ60649 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ClpbQ60649 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ClpbQ60649 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.7□□□□□ -0.54
ClpbQ60649 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.7□□□□□ -0.54
ClpbQ60649 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
ClpbQ60649 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ClpbQ60649 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ClpbQ60649 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.69□□□□□ -0.54
ClpbQ60649 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.69□□□□□ -0.54
ClpbQ60649 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ClpbQ60649 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ClpbQ60649 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Gm11930-201ENSMUST00000117788 190 ntBASIC11.69□□□□□ -0.54
ClpbQ60649 Gm14999-201ENSMUST00000121039 624 ntBASIC11.69□□□□□ -0.54
ClpbQ60649 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.69□□□□□ -0.54
ClpbQ60649 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.69□□□□□ -0.54
ClpbQ60649 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.69□□□□□ -0.54
ClpbQ60649 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ClpbQ60649 Gm9022-201ENSMUST00000182482 992 ntBASIC11.69□□□□□ -0.54
ClpbQ60649 Gm3096-201ENSMUST00000185770 364 ntBASIC11.69□□□□□ -0.54
ClpbQ60649 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.69□□□□□ -0.54
ClpbQ60649 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.69□□□□□ -0.54
ClpbQ60649 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.69□□□□□ -0.54
ClpbQ60649 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.69□□□□□ -0.54
ClpbQ60649 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.69□□□□□ -0.54
ClpbQ60649 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
ClpbQ60649 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.69□□□□□ -0.54
ClpbQ60649 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClpbQ60649 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.68□□□□□ -0.54
ClpbQ60649 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ClpbQ60649 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClpbQ60649 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClpbQ60649 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClpbQ60649 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClpbQ60649 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClpbQ60649 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.68□□□□□ -0.54
ClpbQ60649 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClpbQ60649 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClpbQ60649 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
ClpbQ60649 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClpbQ60649 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClpbQ60649 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ClpbQ60649 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms