Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim80Q3V061 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim80Q3V061 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Gm38002-201ENSMUST00000193255 180 ntBASIC12.62□□□□□ -0.39
Trim80Q3V061 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.62□□□□□ -0.39
Trim80Q3V061 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim80Q3V061 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.62□□□□□ -0.39
Trim80Q3V061 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.62□□□□□ -0.39
Trim80Q3V061 Gm26035-201ENSMUST00000083065 308 ntBASIC12.62□□□□□ -0.39
Trim80Q3V061 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trim80Q3V061 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim80Q3V061 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim80Q3V061 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim80Q3V061 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim80Q3V061 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.61□□□□□ -0.39
Trim80Q3V061 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.61□□□□□ -0.39
Trim80Q3V061 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim80Q3V061 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Gm1335-201ENSMUST00000121653 386 ntBASIC12.61□□□□□ -0.39
Trim80Q3V061 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim80Q3V061 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim80Q3V061 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim80Q3V061 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.61□□□□□ -0.39
Trim80Q3V061 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Gm43822-201ENSMUST00000200285 476 ntBASIC12.61□□□□□ -0.39
Trim80Q3V061 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.61□□□□□ -0.39
Trim80Q3V061 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.61□□□□□ -0.39
Trim80Q3V061 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.61□□□□□ -0.39
Trim80Q3V061 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.61□□□□□ -0.39
Trim80Q3V061 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Trim80Q3V061 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim80Q3V061 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim80Q3V061 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.6□□□□□ -0.39
Trim80Q3V061 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim80Q3V061 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trim80Q3V061 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.6□□□□□ -0.39
Trim80Q3V061 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim80Q3V061 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim80Q3V061 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim80Q3V061 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms