Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Gm9162-201ENSMUST00000182081 991 ntBASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Gm29543-201ENSMUST00000188138 967 ntBASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Spg11Q3UHA3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Gm23745-201ENSMUST00000104230 125 ntBASIC11.15□□□□□ -0.62
Spg11Q3UHA3 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Gm10263-201ENSMUST00000085163 300 ntBASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Spg11Q3UHA3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Spg11Q3UHA3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Spg11Q3UHA3 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Spg11Q3UHA3 Gm15136-201ENSMUST00000120552 533 ntBASIC11.15□□□□□ -0.63
Spg11Q3UHA3 Gm15746-201ENSMUST00000120684 1027 ntBASIC11.15□□□□□ -0.63
Spg11Q3UHA3 Gm11952-201ENSMUST00000121172 821 ntBASIC11.15□□□□□ -0.63
Spg11Q3UHA3 Gm25569-201ENSMUST00000157175 131 ntBASIC11.15□□□□□ -0.63
Spg11Q3UHA3 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Spg11Q3UHA3 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Spg11Q3UHA3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Spg11Q3UHA3 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.63
Spg11Q3UHA3 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Spg11Q3UHA3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Gm26174-201ENSMUST00000158415 219 ntBASIC11.14□□□□□ -0.63
Spg11Q3UHA3 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Gm37826-201ENSMUST00000195329 322 ntBASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Mir341-201ENSMUST00000093593 96 ntBASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Spg11Q3UHA3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms