Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm23049-201ENSMUST00000178068 102 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm28019-201ENSMUST00000178138 101 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm25571-201ENSMUST00000178322 102 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm25355-201ENSMUST00000178456 101 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm24975-201ENSMUST00000178492 101 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm23189-201ENSMUST00000178954 102 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm25100-201ENSMUST00000179750 101 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm23064-201ENSMUST00000179866 101 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm4654-201ENSMUST00000183305 982 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm27530-201ENSMUST00000184096 98 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm29640-201ENSMUST00000187972 278 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm19587-201ENSMUST00000191395 545 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC12.24□□□□□ -0.45
Col9a1Q05722 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm4157-201ENSMUST00000211647 679 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 AC159810.1-201ENSMUST00000214838 1480 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm18329-201ENSMUST00000215832 589 ntBASIC12.24□□□□□ -0.45
Col9a1Q05722 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.24□□□□□ -0.45
Col9a1Q05722 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Col9a1Q05722 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col9a1Q05722 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Col9a1Q05722 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Col9a1Q05722 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Mir669p-2-201ENSMUST00000103868 87 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 Mir669p-1-201ENSMUST00000103884 87 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm13171-201ENSMUST00000117233 391 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm24078-201ENSMUST00000158184 103 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Col9a1Q05722 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm22906-201ENSMUST00000175191 250 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm21092-201ENSMUST00000178995 955 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12.23□□□□□ -0.45
Col9a1Q05722 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.23□□□□□ -0.45
Col9a1Q05722 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm33707-201ENSMUST00000195135 569 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC12.23□□□□□ -0.45
Col9a1Q05722 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm17936-201ENSMUST00000199413 988 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm3726-201ENSMUST00000203110 785 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm6423-201ENSMUST00000204315 934 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm6331-201ENSMUST00000217890 450 ntBASIC12.23□□□□□ -0.45
Col9a1Q05722 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Col9a1Q05722 Reg2-201ENSMUST00000023906 698 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col9a1Q05722 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms