Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43bP86448 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim43bP86448 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.54□□□□□ -0.4
Trim43bP86448 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim43bP86448 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.54□□□□□ -0.4
Trim43bP86448 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim43bP86448 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim43bP86448 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trim43bP86448 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Gm27501-201ENSMUST00000183599 107 ntBASIC12.54□□□□□ -0.4
Trim43bP86448 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.54□□□□□ -0.4
Trim43bP86448 Gm18935-201ENSMUST00000212692 664 ntBASIC12.54□□□□□ -0.4
Trim43bP86448 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim43bP86448 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim43bP86448 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim43bP86448 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim43bP86448 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim43bP86448 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.54□□□□□ -0.4
Trim43bP86448 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.54□□□□□ -0.4
Trim43bP86448 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim43bP86448 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Trim43bP86448 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.54□□□□□ -0.4
Trim43bP86448 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim43bP86448 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43bP86448 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim43bP86448 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.53□□□□□ -0.4
Trim43bP86448 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim43bP86448 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim43bP86448 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.53□□□□□ -0.4
Trim43bP86448 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.53□□□□□ -0.4
Trim43bP86448 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim43bP86448 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim43bP86448 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.53□□□□□ -0.4
Trim43bP86448 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trim43bP86448 Gm10434-201ENSMUST00000101158 471 ntBASIC12.53□□□□□ -0.4
Trim43bP86448 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trim43bP86448 Gm13786-201ENSMUST00000122371 333 ntBASIC12.53□□□□□ -0.4
Trim43bP86448 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim43bP86448 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim43bP86448 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trim43bP86448 Gm29396-201ENSMUST00000185659 716 ntBASIC12.53□□□□□ -0.4
Trim43bP86448 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Trim43bP86448 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim43bP86448 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.53□□□□□ -0.4
Trim43bP86448 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim43bP86448 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim43bP86448 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43bP86448 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trim43bP86448 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43bP86448 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43bP86448 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.52□□□□□ -0.4
Trim43bP86448 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43bP86448 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43bP86448 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim43bP86448 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms