Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Prox1P48437 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.71□□□□□ -0.54
Prox1P48437 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.71□□□□□ -0.54
Prox1P48437 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Prox1P48437 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.71□□□□□ -0.54
Prox1P48437 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Prox1P48437 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.7□□□□□ -0.54
Prox1P48437 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.7□□□□□ -0.54
Prox1P48437 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.7□□□□□ -0.54
Prox1P48437 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.7□□□□□ -0.54
Prox1P48437 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Prox1P48437 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Gm37042-201ENSMUST00000193816 581 ntBASIC11.7□□□□□ -0.54
Prox1P48437 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.7□□□□□ -0.54
Prox1P48437 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.7□□□□□ -0.54
Prox1P48437 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Prox1P48437 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.7□□□□□ -0.54
Prox1P48437 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.7□□□□□ -0.54
Prox1P48437 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Prox1P48437 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Prox1P48437 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Prox1P48437 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.7□□□□□ -0.54
Prox1P48437 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Prox1P48437 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.69□□□□□ -0.54
Prox1P48437 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.69□□□□□ -0.54
Prox1P48437 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.69□□□□□ -0.54
Prox1P48437 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Prox1P48437 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.69□□□□□ -0.54
Prox1P48437 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.69□□□□□ -0.54
Prox1P48437 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Prox1P48437 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.69□□□□□ -0.54
Prox1P48437 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.69□□□□□ -0.54
Prox1P48437 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.69□□□□□ -0.54
Prox1P48437 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Prox1P48437 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Prox1P48437 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.69□□□□□ -0.54
Prox1P48437 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Prox1P48437 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.69□□□□□ -0.54
Prox1P48437 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.69□□□□□ -0.54
Prox1P48437 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Prox1P48437 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Prox1P48437 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Prox1P48437 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Prox1P48437 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms