Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.36□□□□□ -0.43
Vps4bP46467 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Vps4bP46467 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Gm37201-201ENSMUST00000191845 523 ntBASIC12.36□□□□□ -0.43
Vps4bP46467 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.36□□□□□ -0.43
Vps4bP46467 Gm39404-201ENSMUST00000216350 313 ntBASIC12.36□□□□□ -0.43
Vps4bP46467 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.36□□□□□ -0.43
Vps4bP46467 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Vps4bP46467 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.36□□□□□ -0.43
Vps4bP46467 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vps4bP46467 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Vps4bP46467 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vps4bP46467 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps4bP46467 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps4bP46467 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Vps4bP46467 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Vps4bP46467 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vps4bP46467 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.35□□□□□ -0.43
Vps4bP46467 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Vps4bP46467 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Gm14999-201ENSMUST00000121039 624 ntBASIC12.35□□□□□ -0.43
Vps4bP46467 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.35□□□□□ -0.43
Vps4bP46467 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.35□□□□□ -0.43
Vps4bP46467 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.35□□□□□ -0.43
Vps4bP46467 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Gm27514-201ENSMUST00000183692 110 ntBASIC12.35□□□□□ -0.43
Vps4bP46467 Gm37466-201ENSMUST00000195692 652 ntBASIC12.35□□□□□ -0.43
Vps4bP46467 Gm44364-201ENSMUST00000198368 141 ntBASIC12.35□□□□□ -0.43
Vps4bP46467 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.35□□□□□ -0.43
Vps4bP46467 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.35□□□□□ -0.43
Vps4bP46467 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Vps4bP46467 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.35□□□□□ -0.43
Vps4bP46467 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vps4bP46467 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vps4bP46467 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vps4bP46467 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Vps4bP46467 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.35□□□□□ -0.43
Vps4bP46467 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vps4bP46467 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps4bP46467 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps4bP46467 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps4bP46467 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.34□□□□□ -0.43
Vps4bP46467 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 Gm15236-201ENSMUST00000117309 379 ntBASIC12.34□□□□□ -0.43
Vps4bP46467 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps4bP46467 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.34□□□□□ -0.43
Vps4bP46467 Gm18056-201ENSMUST00000207670 568 ntBASIC12.34□□□□□ -0.43
Vps4bP46467 Gm18061-201ENSMUST00000208350 562 ntBASIC12.34□□□□□ -0.43
Vps4bP46467 Gm18063-201ENSMUST00000208529 568 ntBASIC12.34□□□□□ -0.43
Vps4bP46467 Gm18052-201ENSMUST00000208750 559 ntBASIC12.34□□□□□ -0.43
Vps4bP46467 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vps4bP46467 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vps4bP46467 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.34□□□□□ -0.43
Vps4bP46467 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms