Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Gm9794-201ENSMUST00000202370 423 ntBASIC8.19□□□□□ -1.1
Rpl28P41105 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC8.19□□□□□ -1.1
Rpl28P41105 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC8.19□□□□□ -1.1
Rpl28P41105 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 CT030657.3-201ENSMUST00000222707 1200 ntBASIC8.19□□□□□ -1.1
Rpl28P41105 Wdyhv1-206ENSMUST00000227142 786 ntBASIC8.19□□□□□ -1.1
Rpl28P41105 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Rpl28P41105 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
Rpl28P41105 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC8.19□□□□□ -1.1
Rpl28P41105 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Rpl28P41105 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 AC166359.1-201ENSMUST00000220243 1871 ntBASIC8.19□□□□□ -1.1
Rpl28P41105 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC8.19□□□□□ -1.1
Rpl28P41105 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Rpl28P41105 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Rpl28P41105 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rpl28P41105 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Gm44260-201ENSMUST00000204946 2094 ntBASIC8.18□□□□□ -1.1
Rpl28P41105 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
Rpl28P41105 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC8.18□□□□□ -1.1
Rpl28P41105 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC8.18□□□□□ -1.1
Rpl28P41105 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
Rpl28P41105 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC8.18□□□□□ -1.1
Rpl28P41105 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Rpl28P41105 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC8.18□□□□□ -1.1
Rpl28P41105 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC8.18□□□□□ -1.1
Rpl28P41105 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
Rpl28P41105 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Gm7642-201ENSMUST00000216345 1809 ntBASIC8.18□□□□□ -1.1
Rpl28P41105 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC8.18□□□□□ -1.1
Rpl28P41105 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Gm12291-201ENSMUST00000121627 311 ntBASIC8.18□□□□□ -1.1
Rpl28P41105 Gm13394-201ENSMUST00000121658 1000 ntBASIC8.18□□□□□ -1.1
Rpl28P41105 Gm14760-201ENSMUST00000121831 999 ntBASIC8.18□□□□□ -1.1
Rpl28P41105 Gm11978-201ENSMUST00000122315 466 ntBASIC8.18□□□□□ -1.1
Rpl28P41105 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC8.18□□□□□ -1.1
Rpl28P41105 Gm6244-201ENSMUST00000178732 841 ntBASIC8.18□□□□□ -1.1
Rpl28P41105 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC8.18□□□□□ -1.1
Rpl28P41105 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC8.18□□□□□ -1.1
Rpl28P41105 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC8.18□□□□□ -1.1
Rpl28P41105 Gm28693-202ENSMUST00000190758 331 ntBASIC8.18□□□□□ -1.1
Rpl28P41105 Gm37922-201ENSMUST00000195596 455 ntBASIC8.18□□□□□ -1.1
Rpl28P41105 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC8.18□□□□□ -1.1
Rpl28P41105 AC134254.1-201ENSMUST00000221362 167 ntBASIC8.18□□□□□ -1.1
Rpl28P41105 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC8.18□□□□□ -1.1
Rpl28P41105 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Rpl28P41105 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Rpl28P41105 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC8.18□□□□□ -1.1
Rpl28P41105 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC8.18□□□□□ -1.1
Rpl28P41105 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl28P41105 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms