Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox6P40645 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.45□□□□□ -0.58
Sox6P40645 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox6P40645 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox6P40645 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sox6P40645 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.45□□□□□ -0.58
Sox6P40645 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox6P40645 Gm12742-201ENSMUST00000117326 410 ntBASIC11.45□□□□□ -0.58
Sox6P40645 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
Sox6P40645 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.45□□□□□ -0.58
Sox6P40645 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Sox6P40645 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.45□□□□□ -0.58
Sox6P40645 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox6P40645 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.45□□□□□ -0.58
Sox6P40645 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.45□□□□□ -0.58
Sox6P40645 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.45□□□□□ -0.58
Sox6P40645 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox6P40645 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.45□□□□□ -0.58
Sox6P40645 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox6P40645 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sox6P40645 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.45□□□□□ -0.58
Sox6P40645 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sox6P40645 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.44□□□□□ -0.58
Sox6P40645 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.44□□□□□ -0.58
Sox6P40645 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Sox6P40645 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Sox6P40645 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Sox6P40645 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Sox6P40645 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.44□□□□□ -0.58
Sox6P40645 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.44□□□□□ -0.58
Sox6P40645 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.44□□□□□ -0.58
Sox6P40645 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Sox6P40645 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.44□□□□□ -0.58
Sox6P40645 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.44□□□□□ -0.58
Sox6P40645 Gm8227-201ENSMUST00000223306 571 ntBASIC11.44□□□□□ -0.58
Sox6P40645 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.44□□□□□ -0.58
Sox6P40645 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Sox6P40645 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.44□□□□□ -0.58
Sox6P40645 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.44□□□□□ -0.58
Sox6P40645 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sox6P40645 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sox6P40645 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sox6P40645 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.43□□□□□ -0.58
Sox6P40645 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sox6P40645 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms