Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 Gm14760-201ENSMUST00000121831 999 ntBASIC12.49□□□□□ -0.41
Cxcl12P40224 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.49□□□□□ -0.41
Cxcl12P40224 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.49□□□□□ -0.41
Cxcl12P40224 Gm26989-201ENSMUST00000182608 749 ntBASIC12.49□□□□□ -0.41
Cxcl12P40224 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Ighv1-2-201ENSMUST00000195325 378 ntBASIC12.49□□□□□ -0.41
Cxcl12P40224 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.49□□□□□ -0.41
Cxcl12P40224 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.49□□□□□ -0.41
Cxcl12P40224 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cxcl12P40224 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cxcl12P40224 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.48□□□□□ -0.41
Cxcl12P40224 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.48□□□□□ -0.41
Cxcl12P40224 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cxcl12P40224 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cxcl12P40224 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm13351-201ENSMUST00000118087 414 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm13117-201ENSMUST00000120894 691 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm14247-201ENSMUST00000120950 237 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm10169-201ENSMUST00000121822 348 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.48□□□□□ -0.41
Cxcl12P40224 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Cxcl12P40224 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm43610-201ENSMUST00000199117 365 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm44315-201ENSMUST00000203041 219 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm3726-201ENSMUST00000203110 785 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm8342-201ENSMUST00000209839 757 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.48□□□□□ -0.41
Cxcl12P40224 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 Gm5451-201ENSMUST00000080545 579 ntBASIC12.48□□□□□ -0.41
Cxcl12P40224 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cxcl12P40224 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cxcl12P40224 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cxcl12P40224 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cxcl12P40224 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cxcl12P40224 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cxcl12P40224 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.47□□□□□ -0.41
Cxcl12P40224 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.47□□□□□ -0.41
Cxcl12P40224 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Cxcl12P40224 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.47□□□□□ -0.41
Cxcl12P40224 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cxcl12P40224 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms