Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.26□□□□□ -0.45
Fen1P39749 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Gm24231-201ENSMUST00000104315 133 ntBASIC12.26□□□□□ -0.45
Fen1P39749 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Fen1P39749 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.26□□□□□ -0.45
Fen1P39749 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Fen1P39749 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.26□□□□□ -0.45
Fen1P39749 Gm17150-201ENSMUST00000165577 381 ntBASIC12.26□□□□□ -0.45
Fen1P39749 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Fen1P39749 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.26□□□□□ -0.45
Fen1P39749 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.26□□□□□ -0.45
Fen1P39749 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.26□□□□□ -0.45
Fen1P39749 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.26□□□□□ -0.45
Fen1P39749 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.26□□□□□ -0.45
Fen1P39749 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.26□□□□□ -0.45
Fen1P39749 Gm42599-201ENSMUST00000201308 469 ntBASIC12.26□□□□□ -0.45
Fen1P39749 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.26□□□□□ -0.45
Fen1P39749 Gm8463-201ENSMUST00000208573 613 ntBASIC12.26□□□□□ -0.45
Fen1P39749 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.26□□□□□ -0.45
Fen1P39749 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Fen1P39749 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.26□□□□□ -0.45
Fen1P39749 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Fen1P39749 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Fen1P39749 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Fen1P39749 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Fen1P39749 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Fen1P39749 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Fen1P39749 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Fen1P39749 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.25□□□□□ -0.45
Fen1P39749 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.25□□□□□ -0.45
Fen1P39749 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Fen1P39749 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.25□□□□□ -0.45
Fen1P39749 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.25□□□□□ -0.45
Fen1P39749 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.25□□□□□ -0.45
Fen1P39749 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.25□□□□□ -0.45
Fen1P39749 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Fen1P39749 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.25□□□□□ -0.45
Fen1P39749 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Fen1P39749 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Fen1P39749 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.24□□□□□ -0.45
Fen1P39749 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.24□□□□□ -0.45
Fen1P39749 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Fen1P39749 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms