Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.24□□□□□ -0.61
Sftpa1P35242 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Sftpa1P35242 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.24□□□□□ -0.61
Sftpa1P35242 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Sftpa1P35242 Gm42518-201ENSMUST00000196277 938 ntBASIC11.24□□□□□ -0.61
Sftpa1P35242 Gm19091-201ENSMUST00000208120 978 ntBASIC11.24□□□□□ -0.61
Sftpa1P35242 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Sftpa1P35242 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.24□□□□□ -0.61
Sftpa1P35242 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.24□□□□□ -0.61
Sftpa1P35242 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.24□□□□□ -0.61
Sftpa1P35242 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Sftpa1P35242 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sftpa1P35242 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Sftpa1P35242 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sftpa1P35242 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Sftpa1P35242 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.24□□□□□ -0.61
Sftpa1P35242 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sftpa1P35242 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Sftpa1P35242 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.23□□□□□ -0.61
Sftpa1P35242 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Sftpa1P35242 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sftpa1P35242 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sftpa1P35242 Gm15352-201ENSMUST00000118696 270 ntBASIC11.23□□□□□ -0.61
Sftpa1P35242 Gm12164-201ENSMUST00000121695 551 ntBASIC11.23□□□□□ -0.61
Sftpa1P35242 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.23□□□□□ -0.61
Sftpa1P35242 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.23□□□□□ -0.61
Sftpa1P35242 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.23□□□□□ -0.61
Sftpa1P35242 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Gm6867-201ENSMUST00000219165 425 ntBASIC11.23□□□□□ -0.61
Sftpa1P35242 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.23□□□□□ -0.61
Sftpa1P35242 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Sftpa1P35242 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.23□□□□□ -0.61
Sftpa1P35242 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.23□□□□□ -0.61
Sftpa1P35242 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sftpa1P35242 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Sftpa1P35242 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sftpa1P35242 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.22□□□□□ -0.61
Sftpa1P35242 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Sftpa1P35242 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sftpa1P35242 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sftpa1P35242 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.22□□□□□ -0.61
Sftpa1P35242 Gm12579-201ENSMUST00000118040 783 ntBASIC11.22□□□□□ -0.61
Sftpa1P35242 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms