Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rom1P32958 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Rom1P32958 Gm44958-201ENSMUST00000203734 736 ntBASIC9.61□□□□□ -0.87
Rom1P32958 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC9.61□□□□□ -0.87
Rom1P32958 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.61□□□□□ -0.87
Rom1P32958 AC154687.2-201ENSMUST00000223853 640 ntBASIC9.61□□□□□ -0.87
Rom1P32958 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rom1P32958 Gm14608-201ENSMUST00000120030 1553 ntBASIC9.61□□□□□ -0.87
Rom1P32958 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.61□□□□□ -0.87
Rom1P32958 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.61□□□□□ -0.87
Rom1P32958 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Rom1P32958 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.61□□□□□ -0.87
Rom1P32958 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Rom1P32958 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Rom1P32958 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.6□□□□□ -0.87
Rom1P32958 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.6□□□□□ -0.87
Rom1P32958 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Rom1P32958 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.6□□□□□ -0.87
Rom1P32958 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Rom1P32958 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.6□□□□□ -0.87
Rom1P32958 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Gm23912-201ENSMUST00000104687 87 ntBASIC9.6□□□□□ -0.87
Rom1P32958 Gm11964-201ENSMUST00000120982 444 ntBASIC9.6□□□□□ -0.87
Rom1P32958 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.6□□□□□ -0.87
Rom1P32958 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC9.6□□□□□ -0.87
Rom1P32958 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.6□□□□□ -0.87
Rom1P32958 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC9.6□□□□□ -0.87
Rom1P32958 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Gm4768-201ENSMUST00000206199 686 ntBASIC9.6□□□□□ -0.87
Rom1P32958 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC9.6□□□□□ -0.87
Rom1P32958 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.6□□□□□ -0.87
Rom1P32958 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.6□□□□□ -0.87
Rom1P32958 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.6□□□□□ -0.87
Rom1P32958 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Rom1P32958 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Rom1P32958 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Rom1P32958 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Rom1P32958 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.6□□□□□ -0.87
Rom1P32958 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.6□□□□□ -0.87
Rom1P32958 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Rom1P32958 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Rom1P32958 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Rom1P32958 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rom1P32958 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Rom1P32958 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rom1P32958 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rom1P32958 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rom1P32958 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rom1P32958 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rom1P32958 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rom1P32958 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rom1P32958 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Rom1P32958 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rom1P32958 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Rom1P32958 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 261.7 ms