Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.18□□□□□ -0.46
PdgfaP20033 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.18□□□□□ -0.46
PdgfaP20033 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.18□□□□□ -0.46
PdgfaP20033 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.18□□□□□ -0.46
PdgfaP20033 Gm26461-201ENSMUST00000175064 290 ntBASIC12.18□□□□□ -0.46
PdgfaP20033 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
PdgfaP20033 Gm6222-202ENSMUST00000182143 629 ntBASIC12.18□□□□□ -0.46
PdgfaP20033 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdgfaP20033 Gm38144-201ENSMUST00000192790 465 ntBASIC12.18□□□□□ -0.46
PdgfaP20033 Gm42660-201ENSMUST00000197733 947 ntBASIC12.18□□□□□ -0.46
PdgfaP20033 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.18□□□□□ -0.46
PdgfaP20033 Gm43084-201ENSMUST00000200696 947 ntBASIC12.18□□□□□ -0.46
PdgfaP20033 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
PdgfaP20033 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdgfaP20033 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdgfaP20033 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdgfaP20033 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
PdgfaP20033 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdgfaP20033 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdgfaP20033 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdgfaP20033 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdgfaP20033 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.18□□□□□ -0.46
PdgfaP20033 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdgfaP20033 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
PdgfaP20033 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdgfaP20033 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.18□□□□□ -0.46
PdgfaP20033 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdgfaP20033 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdgfaP20033 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
PdgfaP20033 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.18□□□□□ -0.46
PdgfaP20033 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.18□□□□□ -0.46
PdgfaP20033 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.18□□□□□ -0.46
PdgfaP20033 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
PdgfaP20033 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.17□□□□□ -0.46
PdgfaP20033 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.17□□□□□ -0.46
PdgfaP20033 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
PdgfaP20033 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Mir877-201ENSMUST00000104738 85 ntBASIC12.17□□□□□ -0.46
PdgfaP20033 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
PdgfaP20033 Gm11618-201ENSMUST00000117946 267 ntBASIC12.17□□□□□ -0.46
PdgfaP20033 Gm12241-201ENSMUST00000118330 726 ntBASIC12.17□□□□□ -0.46
PdgfaP20033 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.17□□□□□ -0.46
PdgfaP20033 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.17□□□□□ -0.46
PdgfaP20033 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.17□□□□□ -0.46
PdgfaP20033 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
PdgfaP20033 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.17□□□□□ -0.46
PdgfaP20033 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.17□□□□□ -0.46
PdgfaP20033 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.17□□□□□ -0.46
PdgfaP20033 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.17□□□□□ -0.46
PdgfaP20033 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
PdgfaP20033 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Gm10608-202ENSMUST00000213924 676 ntBASIC12.17□□□□□ -0.46
PdgfaP20033 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.17□□□□□ -0.46
PdgfaP20033 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.17□□□□□ -0.46
PdgfaP20033 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
PdgfaP20033 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
PdgfaP20033 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
PdgfaP20033 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.17□□□□□ -0.46
PdgfaP20033 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
PdgfaP20033 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.17□□□□□ -0.46
PdgfaP20033 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
PdgfaP20033 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.17□□□□□ -0.46
PdgfaP20033 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
PdgfaP20033 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.16□□□□□ -0.46
PdgfaP20033 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
PdgfaP20033 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
PdgfaP20033 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.16□□□□□ -0.46
PdgfaP20033 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
PdgfaP20033 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms