Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ly6c1P0CW02 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.33□□□□□ -0.75
Ly6c1P0CW02 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.33□□□□□ -0.76
Ly6c1P0CW02 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm11510-201ENSMUST00000120278 347 ntBASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm15225-201ENSMUST00000120449 1017 ntBASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm25668-201ENSMUST00000157700 129 ntBASIC10.33□□□□□ -0.76
Ly6c1P0CW02 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm4857-201ENSMUST00000192718 785 ntBASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gzmn-202ENSMUST00000225535 989 ntBASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.33□□□□□ -0.76
Ly6c1P0CW02 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.33□□□□□ -0.76
Ly6c1P0CW02 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ly6c1P0CW02 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm24934-201ENSMUST00000103764 111 ntBASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm15808-201ENSMUST00000119046 604 ntBASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm5070-201ENSMUST00000177599 862 ntBASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm9630-201ENSMUST00000178304 885 ntBASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm38317-201ENSMUST00000195564 343 ntBASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC10.32□□□□□ -0.76
Ly6c1P0CW02 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms