Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxd3P09027 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm27194-201ENSMUST00000175753 2936 ntBASIC9.67□□□□□ -0.86
Hoxd3P09027 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm43216-201ENSMUST00000196295 1333 ntBASIC9.67□□□□□ -0.86
Hoxd3P09027 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm13394-201ENSMUST00000121658 1000 ntBASIC9.67□□□□□ -0.86
Hoxd3P09027 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC9.67□□□□□ -0.86
Hoxd3P09027 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm29036-201ENSMUST00000189967 877 ntBASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm32999-201ENSMUST00000192693 562 ntBASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm29755-201ENSMUST00000196976 948 ntBASIC9.67□□□□□ -0.86
Hoxd3P09027 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.67□□□□□ -0.86
Hoxd3P09027 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.67□□□□□ -0.86
Hoxd3P09027 AC161537.1-201ENSMUST00000226199 1015 ntBASIC9.67□□□□□ -0.86
Hoxd3P09027 AC113031.8-201ENSMUST00000227856 631 ntBASIC9.67□□□□□ -0.86
Hoxd3P09027 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm10076-201ENSMUST00000073238 384 ntBASIC9.67□□□□□ -0.86
Hoxd3P09027 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Hoxd3P09027 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxd3P09027 Gm38355-201ENSMUST00000192514 1570 ntBASIC9.67□□□□□ -0.86
Hoxd3P09027 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm14109-201ENSMUST00000118814 309 ntBASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm11597-201ENSMUST00000121423 964 ntBASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC9.66□□□□□ -0.86
Hoxd3P09027 Gm13570-201ENSMUST00000140763 309 ntBASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms