Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.24□□□□□ -0.77
Hoxa3P02831 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Gm12015-201ENSMUST00000117065 843 ntBASIC10.24□□□□□ -0.77
Hoxa3P02831 Gm6963-201ENSMUST00000147879 379 ntBASIC10.24□□□□□ -0.77
Hoxa3P02831 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Hoxa3P02831 Gm5070-201ENSMUST00000177599 862 ntBASIC10.24□□□□□ -0.77
Hoxa3P02831 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.24□□□□□ -0.77
Hoxa3P02831 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.24□□□□□ -0.77
Hoxa3P02831 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Rps4l-202ENSMUST00000204242 789 ntBASIC10.24□□□□□ -0.77
Hoxa3P02831 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.24□□□□□ -0.77
Hoxa3P02831 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.24□□□□□ -0.77
Hoxa3P02831 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.24□□□□□ -0.77
Hoxa3P02831 Gm18212-201ENSMUST00000211678 889 ntBASIC10.24□□□□□ -0.77
Hoxa3P02831 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.24□□□□□ -0.77
Hoxa3P02831 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Hoxa3P02831 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.24□□□□□ -0.77
Hoxa3P02831 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Hoxa3P02831 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.24□□□□□ -0.77
Hoxa3P02831 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Hoxa3P02831 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Hoxa3P02831 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Hoxa3P02831 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Gm13996-201ENSMUST00000118456 430 ntBASIC10.23□□□□□ -0.77
Hoxa3P02831 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.23□□□□□ -0.77
Hoxa3P02831 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Gm9022-201ENSMUST00000182482 992 ntBASIC10.23□□□□□ -0.77
Hoxa3P02831 Gm18304-201ENSMUST00000189162 546 ntBASIC10.23□□□□□ -0.77
Hoxa3P02831 Gm8913-201ENSMUST00000209491 641 ntBASIC10.23□□□□□ -0.77
Hoxa3P02831 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.23□□□□□ -0.77
Hoxa3P02831 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.23□□□□□ -0.77
Hoxa3P02831 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.23□□□□□ -0.77
Hoxa3P02831 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.23□□□□□ -0.77
Hoxa3P02831 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Hoxa3P02831 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms