Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.98□□□□□ -0.49
ClppO88696 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
ClppO88696 Gm13875-201ENSMUST00000120162 282 ntBASIC11.98□□□□□ -0.49
ClppO88696 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.98□□□□□ -0.49
ClppO88696 Gm25043-201ENSMUST00000158604 212 ntBASIC11.98□□□□□ -0.49
ClppO88696 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ClppO88696 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Gm44967-201ENSMUST00000207047 631 ntBASIC11.98□□□□□ -0.49
ClppO88696 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
ClppO88696 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.98□□□□□ -0.49
ClppO88696 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.98□□□□□ -0.49
ClppO88696 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ClppO88696 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
ClppO88696 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClppO88696 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.98□□□□□ -0.49
ClppO88696 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.97□□□□□ -0.49
ClppO88696 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ClppO88696 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.97□□□□□ -0.49
ClppO88696 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.97□□□□□ -0.49
ClppO88696 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
ClppO88696 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
ClppO88696 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Gm13813-201ENSMUST00000120998 787 ntBASIC11.97□□□□□ -0.49
ClppO88696 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.97□□□□□ -0.49
ClppO88696 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ClppO88696 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.97□□□□□ -0.49
ClppO88696 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.97□□□□□ -0.49
ClppO88696 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ClppO88696 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.97□□□□□ -0.49
ClppO88696 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.97□□□□□ -0.49
ClppO88696 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
ClppO88696 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.97□□□□□ -0.49
ClppO88696 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
ClppO88696 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.97□□□□□ -0.49
ClppO88696 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.97□□□□□ -0.49
ClppO88696 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.97□□□□□ -0.49
ClppO88696 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
ClppO88696 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClppO88696 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ClppO88696 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClppO88696 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.96□□□□□ -0.49
ClppO88696 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
ClppO88696 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.96□□□□□ -0.49
ClppO88696 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.96□□□□□ -0.49
ClppO88696 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.96□□□□□ -0.49
ClppO88696 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClppO88696 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClppO88696 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClppO88696 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClppO88696 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.96□□□□□ -0.49
ClppO88696 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
ClppO88696 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClppO88696 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClppO88696 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.96□□□□□ -0.49
ClppO88696 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.96□□□□□ -0.49
ClppO88696 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.96□□□□□ -0.49
ClppO88696 Gm26361-201ENSMUST00000158868 186 ntBASIC11.96□□□□□ -0.49
ClppO88696 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.96□□□□□ -0.49
ClppO88696 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.96□□□□□ -0.49
ClppO88696 Gm45186-201ENSMUST00000206874 478 ntBASIC11.96□□□□□ -0.49
ClppO88696 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.96□□□□□ -0.49
ClppO88696 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
ClppO88696 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms