Protein–RNA interactions for Protein: O70479

Tnfaip1, BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip1O70479 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Gm16071-201ENSMUST00000119589 793 ntBASIC12.8□□□□□ -0.36
Tnfaip1O70479 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Gm17826-201ENSMUST00000189720 798 ntBASIC12.8□□□□□ -0.36
Tnfaip1O70479 Gm17877-201ENSMUST00000192578 814 ntBASIC12.8□□□□□ -0.36
Tnfaip1O70479 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Gm2875-201ENSMUST00000211333 360 ntBASIC12.8□□□□□ -0.36
Tnfaip1O70479 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.8□□□□□ -0.36
Tnfaip1O70479 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfaip1O70479 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Gm25880-201ENSMUST00000104331 132 ntBASIC12.79□□□□□ -0.36
Tnfaip1O70479 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Gm15610-201ENSMUST00000120584 195 ntBASIC12.79□□□□□ -0.36
Tnfaip1O70479 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Mir8115-201ENSMUST00000184992 119 ntBASIC12.79□□□□□ -0.36
Tnfaip1O70479 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Gm18893-201ENSMUST00000198416 943 ntBASIC12.79□□□□□ -0.36
Tnfaip1O70479 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.79□□□□□ -0.36
Tnfaip1O70479 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.79□□□□□ -0.36
Tnfaip1O70479 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.79□□□□□ -0.36
Tnfaip1O70479 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfaip1O70479 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Gm11340-201ENSMUST00000119226 412 ntBASIC12.78□□□□□ -0.36
Tnfaip1O70479 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Gm4310-201ENSMUST00000177847 889 ntBASIC12.78□□□□□ -0.36
Tnfaip1O70479 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Gm4034-201ENSMUST00000187674 480 ntBASIC12.78□□□□□ -0.36
Tnfaip1O70479 Gm3551-201ENSMUST00000190750 664 ntBASIC12.78□□□□□ -0.36
Tnfaip1O70479 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Gm37028-201ENSMUST00000194276 107 ntBASIC12.78□□□□□ -0.36
Tnfaip1O70479 Gm43852-201ENSMUST00000202098 917 ntBASIC12.78□□□□□ -0.36
Tnfaip1O70479 Gm18041-201ENSMUST00000218210 618 ntBASIC12.78□□□□□ -0.36
Tnfaip1O70479 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfaip1O70479 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfaip1O70479 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 306.2 ms