Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Smarce1O54941 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Smarce1O54941 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.45□□□□□ -0.1
Smarce1O54941 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Smarce1O54941 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC14.45□□□□□ -0.1
Smarce1O54941 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.45□□□□□ -0.1
Smarce1O54941 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.45□□□□□ -0.1
Smarce1O54941 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Smarce1O54941 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.45□□□□□ -0.1
Smarce1O54941 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.45□□□□□ -0.1
Smarce1O54941 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.45□□□□□ -0.1
Smarce1O54941 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.45□□□□□ -0.1
Smarce1O54941 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.45□□□□□ -0.1
Smarce1O54941 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.45□□□□□ -0.1
Smarce1O54941 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarce1O54941 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Smarce1O54941 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.44□□□□□ -0.1
Smarce1O54941 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.44□□□□□ -0.1
Smarce1O54941 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.44□□□□□ -0.1
Smarce1O54941 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.44□□□□□ -0.1
Smarce1O54941 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.44□□□□□ -0.1
Smarce1O54941 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Smarce1O54941 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smarce1O54941 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.44□□□□□ -0.1
Smarce1O54941 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.44□□□□□ -0.1
Smarce1O54941 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Snora73a-201ENSMUST00000082453 205 ntBASIC14.44□□□□□ -0.1
Smarce1O54941 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.44□□□□□ -0.1
Smarce1O54941 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Smarce1O54941 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC14.44□□□□□ -0.1
Smarce1O54941 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Smarce1O54941 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarce1O54941 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Smarce1O54941 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Smarce1O54941 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarce1O54941 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Smarce1O54941 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Smarce1O54941 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smarce1O54941 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smarce1O54941 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Smarce1O54941 Gm13570-201ENSMUST00000140763 309 ntBASIC14.43□□□□□ -0.1
Smarce1O54941 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarce1O54941 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.43□□□□□ -0.1
Smarce1O54941 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarce1O54941 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.43□□□□□ -0.1
Smarce1O54941 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Smarce1O54941 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.43□□□□□ -0.1
Smarce1O54941 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarce1O54941 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Smarce1O54941 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarce1O54941 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarce1O54941 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms